Agrobacterium tumefaciens str. CFBP 5621

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. CFBP 5621 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. As an aerobic organism, it requires oxygen for its metabolic processes and can inhabit a variety of environments, suggesting a versatile ecological adaptability. This strain, like other members of the Agrobacterium genus, is well-known for its role in plant interactions, particularly through the transfer of DNA to plant cells, a process that can lead to tumor formation in plants. The ability of A. tumefaciens to survive in multiple habitats may contribute to its widespread presence in agricultural settings, where it can interact with various plant species. The optimal growth temperature indicates a preference for moderate environmental conditions, common in temperate climates, which may facilitate its proliferation in diverse ecosystems. Understanding the growth characteristics and ecological preferences of A. tumefaciens str. CFBP 5621 can provide insights into its potential applications in biotechnology, particularly in genetic engineering and plant transformation techniques. The bacterium's adaptability to various habitats underscores its significance in ecological studies, where it may play a role in microbial community dynamics and plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainCFBP 5621

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. CFBP 5621
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. CFBP 5621


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1670118 - 1670132Not Available
Penicillin-binding protein 6bAGR4B_Cc60787Not Available-1680932 - 168241351393.2
conserved hypothetical proteinAGR4B_Cc60788Not Available-1682552 - 168327126699.0
conserved hypothetical proteinAGR4B_Cc60789Not Available+1683409 - 16836729895.65
hypothetical proteinAGR4B_Cc60790Not Available+1683688 - 16839158248.07
conserved hypothetical proteinAGR4B_Cc60791Not Available-1684143 - 16842594617.84
hypothetical proteinAGR4B_Cc60792Not Available-1684363 - 16846058655.64
Trna,type:ser,anti_codon:tga;Not AvailableNot Available+1684499 - 1684588Not Available
Hypothetical proteinAGR4B_Cc60793Not Available-1684659 - 168551332399.5
hypothetical proteinAGR4B_Cc60794Not Available-1685621 - 168603715454.5

Displaying genes 1 – 10 of 1762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites