MAG TPA_asm: Rhizobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. MAG TPA_asm is a Gram-negative, non-sporulating bacterium that thrives in aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe has been isolated from the rhizosphere of Borj Cedria soil, indicating its association with plant roots, where it likely engages in beneficial interactions with host plants. As a member of the Rhizobium genus, this bacterium is expected to play a role in nitrogen fixation, a process that enhances soil fertility and promotes plant growth. Its habitat in the rhizosphere suggests that it may also contribute to the overall health of the soil microbiome, as rhizobacteria are known to influence nutrient cycling and plant health through various mechanisms. The non-sporulating nature of Rhizobium sp. MAG TPA_asm implies a reliance on specific environmental conditions for survival and growth, making it particularly sensitive to changes in its habitat. This trait, combined with its aerobic requirement, underscores the importance of oxygen availability and suitable temperature ranges in defining its ecological niche. The unique habitat of Borj Cedria soil may further influence the metabolic pathways and interactions of this bacterium, potentially leading to adaptations that enhance its survival in this specific environment. Understanding the traits of Rhizobium sp. MAG TPA_asm can provide insights into the complex relationships between soil microbes and plant health, particularly in Mediterranean ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of MAG TPA_asm: Rhizobium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature28
Temperature rangeNot Available
HabitatBorj cedria soil; rhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Rhizobium sp.


Gene Summary

Adenine Count

924860 bp

Thymine Count

928312 bp

Guanine Count

1472885 bp

Cytosine Count

1476731 bp

Genome Length

4808122 bp

Protein-coding Genes

4607 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Major capsid proteinDIC56_16525Not Available+3297515 - 329877144523.0
3-oxoacyl-(acyl-carrier-protein) reductaseDIC56_16530Not Available-3298945 - 329968826116.0
tetr family transcriptional regulatorDIC56_16535Not Available+3299780 - 330033119712.6
aldehyde-activating proteinDIC56_16540Not Available-3300577 - 330099014602.5
Phage major capsid proteinDIC56_16545Not Available+3301059 - 33011904958.12
Ncrna_class:srp_rnaNot AvailableNot Available+31 - 127Not Available
hypothetical proteinDIC56_00005Not Available-296 - 180452821.8
tripartite tricarboxylate transporter tctb family proteinDIC56_00010Not Available-1815 - 228216144.3
tartrate dehydrogenaseDIC56_00015Not Available-2322 - 279416348.5
tartrate dehydrogenaseDIC56_00020Not Available-2912 - 31468548.27

Displaying genes 31 – 40 of 4672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites