MAG TPA_asm: Flavobacterium sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. MAG TPA_asm is a Gram-negative bacterium characterized by its aerobic metabolic requirements. This species has been identified in two distinct habitats: nasal discharge and natural springs, suggesting a degree of ecological versatility. The presence of Flavobacterium sp. in nasal discharge indicates potential associations with the mucosal surfaces of animals, while its occurrence in natural springs hints at its adaptability to aquatic environments. As a member of the Flavobacteriaceae family, Flavobacterium sp. may play a role in the degradation of organic materials within its habitats, contributing to nutrient cycling in both terrestrial and aquatic ecosystems. Its Gram-negative cell wall structure implies that it possesses an outer membrane containing lipopolysaccharides, which may influence its interactions with other microbial communities and its resilience to environmental stresses. Further studies could elucidate the physiological adaptations that allow Flavobacterium sp. to thrive in diverse ecological niches, as well as its potential interactions with other microbial taxa in both the nasal environment and freshwater systems. Understanding these dynamics may provide insights into the roles of such bacteria in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnasal discharge; natural spring
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Flavobacterium sp.


Gene Summary

Adenine Count

673027 bp

Thymine Count

685544 bp

Guanine Count

374157 bp

Cytosine Count

361052 bp

Genome Length

2093788 bp

Protein-coding Genes

1898 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
macrolide abc transporter atp-binding proteinDER08_00055Not Available-12409 - 1309525075.3
hypothetical proteinDER08_00060Not Available-13204 - 1375521360.6
abc transporterDER08_00065Not Available-13766 - 1562572051.0
diapophytoene dehydrogenaseDER08_00070Not Available+15804 - 1709946550.4
dna polymerase iii subunit epsilonDER08_00075Not Available+17212 - 1798229029.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseDER08_00080Not Available+18002 - 1861322930.6
histidine kinaseDER08_00085Not Available+18613 - 1895713061.0
competence/damage-inducible protein aDER08_00090Not Available+18970 - 2022345585.1
50s ribosomal protein l28DER08_00095Not Available+20297 - 205338778.92
50s ribosomal protein l33DER08_00100Not Available+20561 - 207436906.58

Displaying genes 11 – 20 of 1936 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites