Coprococcus comes strain 2789STDY5834866

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Allocoprococcus

Description

Coprococcus comes strain 2789STDY5834866 is a Gram-positive, cocci-shaped bacterium characterized as an anaerobe. This strain, belonging to the genus Coprococcus, is notable for its ability to thrive in environments devoid of oxygen, which is typical for many members of the gut microbiota. The Gram-positive nature of this bacterium indicates a thick peptidoglycan layer in its cell wall, a trait often associated with various beneficial roles in digestive health. As an anaerobic organism, Coprococcus comes strain 2789STDY5834866 plays a significant role in the fermentation processes occurring within the gastrointestinal tract. Anaerobes like this strain contribute to the breakdown of complex carbohydrates, leading to the production of short-chain fatty acids (SCFAs), which are critical for maintaining gut health and influencing host metabolism. Research into the metabolic capabilities and interactions of this strain may provide insights into its contributions to gut homeostasis and its potential effects on overall health. Given its ecological niche, Coprococcus comes strain 2789STDY5834866 could serve as a model for studying the dynamics of gut microbiota and their influence on host physiological functions, particularly in the context of anaerobic fermentation and SCFA production. Understanding the specific roles of such strains may further elucidate the complex interplay between diet, microbiome composition, and health outcomes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAllocoprococcus
SpeciesAllocoprococcus comes
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprococcus comes strain 2789STDY5834866


Gene Summary

Adenine Count

978505 bp

Thymine Count

914396 bp

Guanine Count

730379 bp

Cytosine Count

660411 bp

Genome Length

3284337 bp

Protein-coding Genes

3056 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase small subunitERS852481_00732Not Available+772333 - 77278216718.9
Putative terminase large subunitERS852481_00733Not Available+772779 - 77402348931.2
Spp1 family portal proteinERS852481_00734Not Available+774025 - 77538952020.5
Minor capsid proteinERS852481_00735Not Available+775337 - 77696563072.1
uncharacterised proteinERS852481_00736Not Available+776965 - 7771477349.84
Putative major head proteinERS852481_00737Not Available+777202 - 77756414061.2
Hypothetical proteinERS852481_00738Not Available+777644 - 77799113382.0
predicted ribosomal proteinERS852481_00739Not Available+777984 - 77827110465.6
Putative scaffold proteinERS852481_00740Not Available+778395 - 77903623032.0
Capsid proteinERS852481_00741Not Available+779058 - 78026644189.6

Displaying genes 1 – 10 of 3153 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

162 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 162 metabolites