Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Large packaging protein | TRN7648_02855 | Not Available | + | 2952082 - 2953362 | 46325.6 |
| Portal protein | TRN7648_02856 | Q1RIH4 | + | 2953544 - 2954737 | 43078.2 |
| hypothetical protein | TRN7648_02857 | Not Available | + | 2954730 - 2954957 | 8545.56 |
| Putative prohead protease | TRN7648_02858 | P49860 | + | 2954972 - 2955514 | 19671.4 |
| Phage major capsid protein | TRN7648_02859 | Not Available | + | 2955573 - 2956823 | 44218.2 |
| phage gp6-like head-tail connector protein | TRN7648_02860 | Not Available | + | 2956977 - 2957570 | 21144.6 |
| bacteriophage head-tail adaptor | TRN7648_02861 | Not Available | + | 2957567 - 2957905 | 12110.3 |
| hypothetical protein | TRN7648_02862 | Not Available | + | 2957902 - 2958318 | 14190.7 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | TRN7648_02863 | Not Available | + | 2958344 - 2958766 | 14701.1 |
| hypothetical protein | TRN7648_02864 | Not Available | + | 2958766 - 2959098 | 11517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
