Mycobacterium abscessus

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacteroides

Description

Mycobacterium abscessus is a rod-shaped bacterium primarily found in chloraminated water environments. This environmental niche suggests that M. abscessus has adapted to survive in water systems where chlorine is used for disinfection, indicating a potential resilience to chemical treatments commonly employed in public health measures. As a member of the Mycobacterium genus, M. abscessus is characterized by its complex lipid-rich cell wall, which contributes to its environmental persistence and resistance to various antibiotics. The bacterium's ability to thrive in chloraminated water may reflect its broader ecological adaptability, possibly facilitating its transmission to humans and other hosts through contaminated water sources. Understanding the habitat preferences of M. abscessus enhances our insight into its potential role in waterborne microbial communities and highlights the importance of monitoring water quality in systems where this organism may be present. The presence of M. abscessus in chloraminated water also raises questions about the effectiveness of standard water treatment processes and the implications for public health, especially in immunocompromised individuals who may be more susceptible to infections caused by environmental bacteria.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacteroides
SpeciesMycobacteroides abscessus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchloraminated water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium abscessus


Gene Summary

Adenine Count

957912 bp

Thymine Count

964299 bp

Guanine Count

1728460 bp

Cytosine Count

1697662 bp

Genome Length

5348343 bp

Protein-coding Genes

5278 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1427112 - 1427124Not Available
Protease specific for gcp(ygjd), essential for nucleoid maintanenceERS075579_01445P9WKY6+1430973 - 143159621356.7
probable ribosomal-protein-alanine acetyltransferase rimiERS075579_01446I6YG32+1431593 - 143206017078.3
Glycation-binding protein, predicted protease/chaperoneERS075579_01447B1MG63+1432073 - 143310734816.7
ring hydroxylating enzyme beta subunitERS075579_01448Not Available+1433107 - 143356216267.1
GroesERS075579_01449A4TEN7+1433746 - 143404510690.7
Molecular chaperone groelERS075579_01450A3PVQ7+1434153 - 143577256156.9
protein of uncharacterised function (duf2510)ERS075579_01451Not Available+1435906 - 143630414016.1
uncharacterised proteinERS075579_01452Not Available+1436314 - 143712930179.1
uncharacterised proteinERS075579_01453Not Available-1437158 - 14374099336.33

Displaying genes 1 – 10 of 5435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

477 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 477 metabolites