Chlamydia trachomatis

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Chlamydiales

Family

Chlamydiaceae

Genus

Chlamydia

Description

Chlamydia trachomatis is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 37.0 °C, which coincides with the human body temperature, reflecting its adaptation as a host-associated microbe. This obligate intracellular pathogen is primarily known for its role in human infections, where it resides within host cells and exhibits a unique developmental cycle. The bacterium's Gram-negative cell wall structure is characterized by a thin peptidoglycan layer surrounded by an outer membrane, which contains lipopolysaccharides. This structural composition contributes to its ability to evade certain host immune responses. Chlamydia trachomatis is dependent on its host for ATP and other essential nutrients, which further underscores its obligate nature. Interestingly, the bacterium's restricted habitat within the host cell environment offers insights into its evolutionary adaptations. Chlamydia trachomatis has developed mechanisms to manipulate host cellular processes, allowing it to establish a niche conducive to its survival and replication. This intricate relationship highlights the complex interplay between host and pathogen, showcasing the necessity of understanding such dynamics for the development of effective therapeutic strategies. The reliance on host cells for survival underscores the broader implications of intracellular lifestyles in microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia trachomatis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Chlamydia trachomatis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chlamydia trachomatis


Gene Summary

Adenine Count

629927 bp

Thymine Count

629397 bp

Guanine Count

395465 bp

Cytosine Count

399342 bp

Genome Length

2082669 bp

Protein-coding Genes

1444 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribonucleoside-diphosphate reductase subunit alphaERS015772_00001O84834+728 - 3871119472.0
16s ribosomal rnaNot AvailableNot Available+1811 - 3351Not Available
23s ribosomal rnaNot AvailableNot Available+3607 - 6541Not Available
ribonucleotide-diphosphate reductase subunit betaERS015772_00002O84835+3909 - 494940446.6
Trna-valNot AvailableNot Available+5877 - 5950Not Available
sam-dependent methyltransferaseERS015772_00004O34614+6005 - 658621379.7
5s ribosomal rnaNot AvailableNot Available+6663 - 6776Not Available
udp-n-acetylenolpyruvoylglucosamine reductaseERS015772_00005Q3KKK8-6583 - 745831622.3
n utilization substance protein bERS015772_00006Q3KKK7-7591 - 837929438.4
bacterial protein translation initiation factor 3 (if-3)ERS015772_00007O84840+8475 - 905621770.7

Displaying genes 1 – 10 of 5077 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

148 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da

Displaying 1–10 of 148 metabolites