[Clostridium] sordellii

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptostreptococcaceae

Genus

Paraclostridium

Description

[Clostridium] sordellii is a Gram-positive, rod-shaped bacterium that exhibits the ability to sporulate and is classified as a chemoheterotroph, relying on organic compounds for energy. This anaerobic microbe is commonly found in soil environments, where it plays a role in the decomposition of organic matter. The ability to form spores allows [C. sordellii] to survive in harsh conditions, contributing to its persistence in soil habitats. As a member of the Clostridia class, [C. sordellii] is known for its anaerobic metabolism, which is essential for its survival in oxygen-deprived environments. The ecological role of [C. sordellii] in soil ecosystems highlights its potential contribution to nutrient cycling, although its specific interactions with other soil microorganisms and plants remain to be fully elucidated. Overall, the presence of [C. sordellii] in soil suggests its involvement in the complex dynamics of microbial communities, particularly in relation to organic matter breakdown and nutrient availability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptostreptococcaceae
GenusParaclostridium
SpeciesParaclostridium sordellii
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] sordellii
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

[Clostridium] sordellii

Accession NumberCEKZ00000000.1

Gene Summary

Adenine Count

1314742 bp

Thymine Count

1309938 bp

Guanine Count

499000 bp

Cytosine Count

488250 bp

Genome Length

3611935 bp

Protein-coding Genes

3498 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
uncharacterised proteinR28058_18531Not Available-1974215 - 19743404979.21
AttrNot AvailableNot Available+1974499 - 1974513Not Available
merr family transcriptional regulatorR28058_18541Not Available+1974623 - 19748719291.37
Puative integrase proteinR28058_18551Not Available+1974868 - 197600443646.3
5s ribosomal rnaNot AvailableNot Available+5 - 78Not Available
5s ribosomal rnaNot AvailableNot Available+92 - 207Not Available
5s ribosomal rnaNot AvailableNot Available+121 - 236Not Available
5s ribosomal rnaNot AvailableNot Available+216 - 331Not Available
5s ribosomal rnaNot AvailableNot Available+225 - 325Not Available
uncharacterised proteinR28058_33521Not Available+238 - 117936280.9

Displaying genes 81 – 90 of 3622 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

160 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 160 metabolites