Hyphomicrobium sp. GJ21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium sp. GJ21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium sp. GJ21

Accession NumberCDHO00000000.1

Gene Summary

Adenine Count

757231 bp

Thymine Count

750643 bp

Guanine Count

1157090 bp

Cytosine Count

1177869 bp

Genome Length

3842833 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rhodanese domain proteinHYPGJ_10545Not Available+516162 - 51660516526.6
chromosomal replication initiator protein dnaaHYPGJ_10546A5E812+516722 - 51824257030.7
dna polymerase iii, beta-subunitHYPGJ_10547P0CAU5+518580 - 51969840499.7
conserved hypothetical proteinHYPGJ_10548Not Available-519807 - 52013012349.6
dna replication and repair protein recfHYPGJ_10549B3PXG8+520249 - 52162549162.0
dna gyrase subunit bHYPGJ_10550P0CAX1+521772 - 52421989975.0
conserved hypothetical proteinHYPGJ_10551Not Available+524340 - 52517932099.1
sodium/hydrogen exchangerHYPGJ_10552O65272-525227 - 52701763003.9
penicillin-binding protein, 1a familyHYPGJ_10553Not Available+527198 - 52961286374.4
conserved hypothetical proteinHYPGJ_10554Not Available-529625 - 53047332183.7

Displaying genes 561 – 570 of 1404 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

107 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da

Displaying 1–10 of 107 metabolites