Vibrio harveyi GAN1709

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio harveyi GAN1709 is a Gram-negative bacterium primarily found in marine environments, specifically within the aquaculture settings of the Changjiang estuary. This organism is part of the Vibrio genus, which is well-known for its role in marine ecosystems and aquaculture practices. The presence of V. harveyi GAN1709 in such habitats suggests its potential involvement in the microbial communities that support fish health and aquaculture productivity. Gram-negative bacteria like V. harveyi typically possess a thin peptidoglycan layer and an outer membrane, characteristics that may confer certain advantages in resistance to environmental stresses commonly found in estuarine environments. The isolation of this strain from aquaculture indicates that it may have adaptations that allow it to thrive in nutrient-rich waters, possibly influencing local microbial dynamics. Further research into V. harveyi GAN1709 could provide insights into its roles within the estuarine ecosystem, particularly in nutrient cycling and interactions with other microbial populations. Its presence in aquaculture highlights the importance of understanding such microorganisms for sustainable practices in marine farming.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio harveyi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
Habitataquaculture; Changjiang estuary; Marine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio harveyi GAN1709


Gene Summary

Adenine Count

1729124 bp

Thymine Count

1729972 bp

Guanine Count

1406309 bp

Cytosine Count

1397307 bp

Genome Length

6265473 bp

Protein-coding Genes

5550 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+630173 - 630186Not Available
Hypothetical proteinVH1709_contig00011-0061Not Available+635477 - 63600420035.8
Terminase large subunitVH1709_contig00011-0062Not Available+636203 - 63762453673.4
Portal proteinVH1709_contig00011-0063Not Available+637671 - 63912554427.4
Minor head proteinVH1709_contig00011-0064Not Available+639141 - 64001032548.3
Hypothetical proteinVH1709_contig00011-0065Not Available+640025 - 64119143151.7
Minor capsid proteinVH1709_contig00011-0066Not Available+641191 - 64171817821.3
Major capsid proteinVH1709_contig00011-0067Not Available+641718 - 64285741921.7
Gp22VH1709_contig00011-0068Not Available+642912 - 64339417968.6
Hypothetical proteinVH1709_contig00011-0069Not Available+643400 - 64383716113.1

Displaying genes 1 – 10 of 5656 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034334-amino-4-deoxychorismateC10H10NO5Chemical structure of 4-amino-4-deoxychorismate133442-18-9
Average224.193Da
Monoisotopic224.056446006Da
BASm0014067p-Aminobenzoic acidC7H7NO2Chemical structure of p-Aminobenzoic acid150-13-0
Average137.136Da
Monoisotopic137.047678473Da

Displaying 1–6 of 6 metabolites