Escherichia coli SI-P006

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli SI-P006 is a Gram-negative, rod-shaped bacterium characterized by its ability to exist in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which is consistent with the typical body temperature of warm-blooded hosts, indicating its adaptation to a host-associated habitat. E. coli SI-P006 is classified as a facultative anaerobe, allowing it to survive in both aerobic and anaerobic environments, which enhances its versatility in various ecological niches within the host. The specific growth conditions and oxygen requirements of E. coli SI-P006 suggest its potential role in the gut microbiome, where it may contribute to metabolic processes or nutrient cycling. Its ability to inhabit host-associated environments underscores the importance of understanding such strains, as they can significantly influence host health and microbial community dynamics. Given the adaptability of E. coli SI-P006 to different oxygen levels, it may also play a role in the interplay between various microbial populations in the gut, particularly under fluctuating conditions. This adaptability could provide insights into microbial resilience and interactions within complex ecosystems, emphasizing the intricate balance that defines host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainSI-P006

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli SI-P006
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli SI-P006


Gene Summary

Adenine Count

1419087 bp

Thymine Count

1418310 bp

Guanine Count

1425243 bp

Cytosine Count

1473823 bp

Genome Length

5740406 bp

Protein-coding Genes

5152 genes

Non-Coding Genes

610 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail assembly proteinBvCmsSIP006_00016Not Available-10969 - 1151718919.8
Tail fiber componentBvCmsSIP006_00017Not Available-11514 - 1211322859.0
rrna,type:5sNot AvailableNot Available+11908 - 1201818.01
Trna-asn;Not AvailableNot Available+12167 - 12242Not Available
Tail componentBvCmsSIP006_00018Not Available-12263 - 1296125761.1
Tail componentBvCmsSIP006_00019Not Available-12961 - 1329012531.0
Tail componentBvCmsSIP006_00020Not Available-13287 - 135268224.54
Tail componentBvCmsSIP006_00021Not Available-13526 - 1534967361.2
Trna-asn;Not AvailableNot Available+13991 - 14066Not Available
Tail componentBvCmsSIP006_00022Not Available-15303 - 1576716099.1

Displaying genes 1 – 10 of 5762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites