Alicycliphilus sp. B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Alicycliphilus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAlicycliphilus
SpeciesAlicycliphilus sp. B1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alicycliphilus sp. B1

Accession NumberBBSJ00000000.1

Gene Summary

Adenine Count

1221346 bp

Thymine Count

1218795 bp

Guanine Count

2513166 bp

Cytosine Count

2512652 bp

Genome Length

7465959 bp

Protein-coding Genes

7354 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tetr family transcriptional regulatorALISP_0535Not Available-511867 - 51258026406.0
lysr family transcriptional regulatorALISP_0536Not Available-512685 - 51361434432.8
naphthalene 1,2-dioxygenase system ferredoxin-nad(+) reductase componentALISP_0537O52378+514145 - 51513135308.6
gentisate 1,2-dioxygenaseALISP_0538Q9S3U6+515149 - 51619538731.9
fumarylpyruvate hydrolaseALISP_0539O86042+516240 - 51693525005.9
biphenyl dioxygenase subunit alphaALISP_0540O52379+516968 - 51823048241.1
salicylate-5-hydroxylase small oxygenase component proteinALISP_0541O52380+518230 - 51871218346.7
methyl-accepting chemotaxis sensory transducerALISP_0542Q88D09+518762 - 51970333341.9
ferredoxin component of salicylate 5-hydroxylaseALISP_0543Q51493+519715 - 52003211553.6
extra-cytoplasmic solute receptorALISP_0544Not Available+520061 - 52107134629.7

Displaying genes 621 – 630 of 7497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

335 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da

Displaying 1–10 of 335 metabolites