Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Aquipseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Aquipseudomonas |
| Species | Aquipseudomonas alcaligenes |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas alcaligenes NBRC 14159
Accession NumberBATI00000000.1
Gene Summary
Adenine Count
859514 bp
Thymine Count
839884 bp
Guanine Count
1541484 bp
Cytosine Count
1582508 bp
Genome Length
4823390 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| reca protein | PA6_034_00180 | Not Available | - | 3700174 - 3701223 | 36953.5 |
| hypothetical protein | PA6_034_00190 | Not Available | - | 3701311 - 3701811 | 17066.2 |
| dna mismatch repair protein muts | PA6_034_00200 | Not Available | + | 3701888 - 3704455 | 94980.2 |
| 4fe-4s ferredoxin | PA6_034_00210 | Not Available | + | 3704593 - 3704916 | 12260.3 |
| putative rna polymerase sigma factor | PA6_034_00220 | Not Available | - | 3705356 - 3706360 | 38223.6 |
| lipoprotein nlpd | PA6_034_00230 | Not Available | - | 3706557 - 3707438 | 30819.0 |
| protein-l-isoaspartate o-methyltransferase | PA6_034_00240 | Not Available | - | 3707537 - 3708211 | 24963.2 |
| 5'-nucleotidase sure | PA6_034_00250 | Not Available | - | 3708211 - 3708960 | 26390.6 |
| trna pseudouridine synthase d | PA6_034_00260 | Not Available | - | 3708948 - 3710006 | 38344.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PA6_034_00270 | Not Available | - | 3710003 - 3710476 | 16666.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.