Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hnh endonuclease | X566_20080 | Not Available | + | 4179104 - 4179376 | 10685.8 |
| Hypothetical protein | X566_20085 | Not Available | + | 4179462 - 4179944 | 18195.9 |
| Large terminase | X566_20090 | Not Available | + | 4179952 - 4181640 | 62645.3 |
| Portal protein | X566_20095 | Not Available | + | 4181644 - 4182900 | 47000.2 |
| Clp protease | X566_20100 | Not Available | + | 4182890 - 4183744 | 30042.7 |
| Major capsid protein | X566_20105 | Not Available | + | 4183762 - 4185000 | 44497.0 |
| hypothetical protein | X566_20110 | Not Available | + | 4185079 - 4185303 | 7654.73 |
| Dna packaging/head-tail-connector | X566_20115 | Not Available | + | 4185311 - 4185940 | 22674.2 |
| hypothetical protein | X566_20120 | Not Available | + | 4185937 - 4186287 | 12398.1 |
| Hypothetical protein | X566_20125 | Not Available | + | 4186287 - 4186958 | 25239.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
