Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging/head-tail-connector | X566_15605 | Not Available | - | 3206941 - 3207501 | 20445.8 |
| peptidase s1 and s6 chymotrypsin/hap | X566_15610 | Not Available | + | 3207563 - 3208339 | 26168.6 |
| hypothetical protein | X566_15615 | Not Available | - | 3208699 - 3209067 | 13726.6 |
| hypothetical protein | X566_15620 | Not Available | - | 3209359 - 3210027 | 25113.7 |
| Major capsid protein | X566_15625 | Not Available | - | 3210230 - 3211480 | 45427.5 |
| Methyltransferase | X566_20005 | Not Available | + | 4168872 - 4170839 | 71323.4 |
| Hypothetical protein | X566_20010 | Not Available | + | 4170836 - 4171318 | 18843.6 |
| hypothetical protein | X566_20015 | Not Available | + | 4171335 - 4171691 | 13343.9 |
| hypothetical protein | X566_20020 | Not Available | + | 4171688 - 4171999 | 11534.3 |
| Hypothetical protein | X566_20025 | Not Available | + | 4171983 - 4172306 | 11821.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
