Escherichia coli 113303

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 113303 is a Gram-negative, rod-shaped bacterium that exhibits a cell arrangement primarily in pairs and singles. This strain thrives optimally at 37.0°C, reflecting its adaptation to a host-associated habitat, which is typical for many members of the Escherichia genus. As a facultative anaerobe, E. coli 113303 can grow in both aerobic and anaerobic environments, allowing it to exploit diverse ecological niches within the host. The ability to switch between aerobic respiration and fermentation pathways is a significant metabolic advantage, facilitating survival in fluctuating oxygen conditions typically found in the intestinal tract of hosts. Furthermore, this adaptability may also play a role in the microbe's interactions with the host's immune system and other microbial inhabitants of the gut. Understanding such traits enables researchers to better appreciate the ecological roles of E. coli strains like 113303 in host-associated environments, as they may contribute to nutrient cycling and influence the overall microbiome composition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain113303

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 113303
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 113303


Gene Summary

Adenine Count

1239890 bp

Thymine Count

1235348 bp

Guanine Count

1280543 bp

Cytosine Count

1262384 bp

Genome Length

5018165 bp

Protein-coding Genes

4944 genes

Non-Coding Genes

373 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Transposase is605HMPREF1591_00197Not Available-182743 - 1828735183.29
Hypothetical proteinHMPREF1591_00198Not Available+182973 - 185960108701.0
Putative repressor protein hxrHMPREF1591_00199Not Available+185950 - 18626111120.7
Putative large terminase proteinHMPREF1591_00200Not Available-186293 - 18738741609.6
Trna-phe;Not AvailableNot Available+187018 - 187093Not Available
IsaaHMPREF1591_00201Not Available-187380 - 18828233595.5
Single-stranded dna-binding proteinHMPREF1591_00202Not Available-188371 - 18885918074.1
LysozymeHMPREF1591_00203Not Available+188987 - 18958622032.7
Lysis determinant lydd, putative holinHMPREF1591_00204Not Available+189579 - 1898339937.6
Putative head processing protein proHMPREF1591_00205Not Available-189878 - 19089736886.0

Displaying genes 1 – 10 of 5317 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites