Escherichia coli UMEA 3212-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli UMEA 3212-1 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments, making it versatile in various habitats. E. coli UMEA 3212-1 has an optimal growth temperature of 37.0°C, which aligns with the physiological temperature of many mammalian hosts, suggesting a close association with such environments. Given its host-associated habitat, E. coli UMEA 3212-1 may play a role in the complex microbial communities found within the gastrointestinal tracts of mammals, where it could contribute to various metabolic processes. Its adaptability to both oxygen-rich and oxygen-poor conditions may enhance its survival and functionality within these dynamic ecosystems. The ability to form pairs and single cells aids its colonization and interaction with other microbial species, potentially influencing community structure and function in its specific habitat. Understanding the traits of E. coli UMEA 3212-1 can provide insights into the ecological roles of E. coli strains in host-associated microbiomes, particularly in terms of their adaptability and interactions with host metabolism.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainUMEA 3212-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli UMEA 3212-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli UMEA 3212-1


Gene Summary

Adenine Count

1307283 bp

Thymine Count

1299997 bp

Guanine Count

1326853 bp

Cytosine Count

1356964 bp

Genome Length

5291097 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

554 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
EndolysinG943_00026Not AvailableNegative21870 - 2240319537.4
hypothetical proteinG943_00027Not AvailablePositive22509 - 2278110196.0
Hypothetical proteinG943_00028Not AvailableNegative22747 - 2309112954.7
Trna-asn;Not AvailableNot AvailablePositive22828 - 22902Not Available
Trna-thr;Not AvailableNot AvailablePositive22908 - 22983Not Available
Putative holinG943_00029Not AvailableNegative23096 - 233117778.49
outer membrane porin ompdG943_00030Not AvailablePositive23901 - 2498339611.6
Trna-phe;Not AvailableNot AvailablePositive24757 - 24832Not Available
Antitermination protein qG943_00031Not AvailableNegative25173 - 2555614173.3
Holliday junction resolvase rusaG943_00032Not AvailableNegative25779 - 2614113828.7

Displaying genes 61 – 70 of 5295 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.