Escherichia coli UMEA 3162-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli UMEA 3162-1 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is categorized as a facultative anaerobe, which indicates its ability to thrive in both aerobic and anaerobic environments. E. coli UMEA 3162-1 has an optimal growth temperature of 37.0°C, aligning with the physiological temperature of many mammalian hosts, suggesting its adaptation to host-associated habitats. As a member of the Enterobacteriaceae family, E. coli is commonly found in the intestines of warm-blooded organisms, where it plays a significant role in digestion and nutrient absorption. The facultative anaerobic nature of this strain allows it to efficiently utilize available oxygen while also having the capacity to ferment substrates in its absence, which is advantageous for survival in diverse environments within the host. Understanding the capabilities of E. coli UMEA 3162-1 sheds light on the broader ecological interactions of bacteria in host-associated environments. This strain may contribute to the complex microbial communities present in the gastrointestinal tract, influencing nutrient cycling and host health through its metabolic activities. Further exploration of its interactions with other gut microbiota could provide insights into the dynamics of microbial symbiosis and the overall functioning of the host's microbiome.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainUMEA 3162-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli UMEA 3162-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli UMEA 3162-1


Gene Summary

Adenine Count

1290709 bp

Thymine Count

1287862 bp

Guanine Count

1313797 bp

Cytosine Count

1333718 bp

Genome Length

5226086 bp

Protein-coding Genes

4651 genes

Non-Coding Genes

432 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative tail tip assembly proteinG925_01323Not AvailablePositive1359664 - 136194983034.1
Putative lom-like outer membrane proteinG925_01324Not AvailablePositive1362017 - 136261621804.1
Qin prophageG925_01325Not AvailablePositive1362768 - 136574398522.7
Qin prophageG925_01326Not AvailablePositive1365743 - 136632721745.3
hypothetical proteinG925_01327Not AvailableNegative1366382 - 136703824046.8
Tail fiber assembly proteinG925_01328Not AvailablePositive1367107 - 136737610411.1
Hypothetical proteinG925_01329Not AvailablePositive1367491 - 13676616228.47
AttlNot AvailableNot AvailablePositive2163578 - 2163592Not Available
Putative positive regulator of late gene transcriptionG925_02078Not AvailableNegative2163631 - 21638498402.08
Tail proteinG925_02079Not AvailableNegative2163931 - 216509442829.0

Displaying genes 151 – 160 of 5083 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.