Helicobacter pylori SouthAfrica50

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori SouthAfrica50 is a microaerophilic, gram-negative bacterium characterized by its spirilla shape and presence of flagella. It typically exists in a host-associated habitat, specifically within the stomach lining of humans. The bacterium demonstrates a single-cell arrangement and lacks mobility, which is facilitated by its flagella. H. pylori SouthAfrica50 thrives optimally at 37°C, indicating its mesophilic nature, which aligns with the average human body temperature. The bacterium possesses a unique genomic structure, featuring one replicon and two membranes, which is typical for gram-negative organisms. As a free-living organism, H. pylori engages in a biotic relationship with its host, often leading to various gastrointestinal conditions, including gastritis and peptic ulcers. Its ability to survive in the acidic environment of the stomach is a significant ecological adaptation, allowing it to persist and replicate effectively within this niche. The presence of this bacterium in human populations, particularly in regions like South Africa, highlights the interplay between microbial life and human health. Understanding the traits of H. pylori SouthAfrica50 can provide insights into its pathogenic potential and the ecological dynamics of human-associated microbiota, underscoring the importance of studying host-associated microorganisms in relation to public health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainSouthAfrica50

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori SouthAfrica50
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori SouthAfrica50


Gene Summary

Adenine Count

493282 bp

Thymine Count

488922 bp

Guanine Count

309943 bp

Cytosine Count

308021 bp

Genome Length

1600214 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
binding--dependent transport system inner membrane component family proteinHPSA50_0438Not AvailablePositive343007 - 34380129374.9
binding--dependent transport system inner membrane component family proteinHPSA50_0439Not AvailablePositive343767 - 34405410568.2
bacterial sh3 domain proteinHPSA50_0440Not AvailablePositive344075 - 34465021253.4
shikimate 5-dehydrogenaseHPSA50_0441Not AvailablePositive344658 - 34546429636.2
rnb domain proteinHPSA50_0442Not AvailablePositive345449 - 34738374572.2
dna polymerase iii, delta subunitHPSA50_0443Not AvailablePositive347373 - 34838939176.3
ribosomal protein s6HPSA50_0444Not AvailablePositive348549 - 34897716943.3
single-stranded dna-binding family proteinHPSA50_0445Not AvailablePositive348994 - 34953920339.8
ribosomal protein s18HPSA50_0446Not AvailablePositive349563 - 34982010448.9
hypothetical proteinHPSA50_0447Not AvailablePositive350134 - 3502986200.7

Displaying genes 441 – 450 of 1938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.