Helicobacter pylori SouthAfrica50

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori SouthAfrica50 is a microaerophilic, gram-negative bacterium characterized by its spirilla shape and presence of flagella. It typically exists in a host-associated habitat, specifically within the stomach lining of humans. The bacterium demonstrates a single-cell arrangement and lacks mobility, which is facilitated by its flagella. H. pylori SouthAfrica50 thrives optimally at 37°C, indicating its mesophilic nature, which aligns with the average human body temperature. The bacterium possesses a unique genomic structure, featuring one replicon and two membranes, which is typical for gram-negative organisms. As a free-living organism, H. pylori engages in a biotic relationship with its host, often leading to various gastrointestinal conditions, including gastritis and peptic ulcers. Its ability to survive in the acidic environment of the stomach is a significant ecological adaptation, allowing it to persist and replicate effectively within this niche. The presence of this bacterium in human populations, particularly in regions like South Africa, highlights the interplay between microbial life and human health. Understanding the traits of H. pylori SouthAfrica50 can provide insights into its pathogenic potential and the ecological dynamics of human-associated microbiota, underscoring the importance of studying host-associated microorganisms in relation to public health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainSouthAfrica50

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori SouthAfrica50
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori SouthAfrica50


Gene Summary

Adenine Count

493282 bp

Thymine Count

488922 bp

Guanine Count

309943 bp

Cytosine Count

308021 bp

Genome Length

1600214 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHPSA50_0328Not AvailableNegative266297 - 2664887595.16
hypothetical proteinHPSA50_0329Not AvailablePositive266460 - 2666246194.45
serine o-acetyltransferaseHPSA50_0330Not AvailablePositive266687 - 26716916777.8
hnh endonuclease family proteinHPSA50_0331Not AvailablePositive267254 - 26794026512.9
d12 class n6 adenine-specific dna methyltransferase family proteinHPSA50_0332Not AvailablePositive267949 - 26893837418.9
outer membrane family proteinHPSA50_0333Not AvailableNegative269225 - 2694799779.93
hypothetical proteinHPSA50_0334Not AvailableNegative269476 - 27000619115.1
hypothetical proteinHPSA50_0335Not AvailableNegative269978 - 27083829896.9
tonb family c-terminal domain proteinHPSA50_0336Not AvailableNegative271015 - 27188131897.3
tonb system transport protein exbdHPSA50_0337Not AvailableNegative271847 - 27223614365.3

Displaying genes 331 – 340 of 1938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.