Paraclostridium bifermentans ATCC 19299

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptostreptococcaceae

Genus

Paraclostridium

Description

Paraclostridium bifermentans ATCC 19299 is a Gram-positive, rod-shaped bacterium characterized by its ability to sporulate and thrive in anaerobic environments. This microbe is classified as a chemoheterotroph, utilizing organic compounds as its energy source, and demonstrates optimal growth at a temperature of 37.0°C, which aligns with the physiological conditions found in warm-blooded animals. Typically residing in the intestinal microflora of various animal hosts, P. bifermentans contributes to the complex ecosystem of gut microbiota, playing a role in fermentation processes within the digestive tract. Its anaerobic requirement highlights the significance of oxygen-limited environments for its survival and metabolic activities. Furthermore, the sporulating ability of this organism suggests an adaptation mechanism for enduring unfavorable conditions, allowing it to persist in the intestinal environment despite fluctuations in local conditions. The presence of P. bifermentans in the gut microbiome raises intriguing questions about its interactions with other microbial species and its potential roles in digestive health and disease. Understanding its specific functions and contributions within the intestinal ecosystem could provide insights into the dynamics of gut microbiota and their implications for host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptostreptococcaceae
GenusParaclostridium
SpeciesParaclostridium bifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paraclostridium bifermentans ATCC 19299
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paraclostridium bifermentans ATCC 19299


Gene Summary

Adenine Count

1257903 bp

Thymine Count

1286192 bp

Guanine Count

490960 bp

Cytosine Count

505664 bp

Genome Length

3540719 bp

Protein-coding Genes

3483 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rhodanese-like domain proteinC671_3504Not Available+3481418 - 348226331856.4
hypothetical proteinC671_3505Not Available-3482319 - 348261211455.9
spbc2 prophage-derived aminoglycoside n(3')-acetyltransferase-like protein yokdC671_3506Not Available-3482691 - 348349730003.7
molybdopterin-binding domain of aldehyde dehydrogenase family proteinC671_3507Not Available-3483617 - 348588183055.9
2fe-2s iron-sulfur cluster binding domain proteinC671_3508Not Available-3485885 - 348633416456.2
fad binding domain in molybdopterin dehydrogenase family proteinC671_3509Not Available-3486328 - 348711929775.0
sodium/hydrogen exchanger family proteinC671_3510Not Available-3487294 - 348852944734.7
xanthine permease family proteinC671_3511Not Available-3488616 - 348996546664.5
inner membrane transporter yjemC671_3512Not Available+3490267 - 349181155224.7
hypothetical proteinC671_3513Not Available+3491926 - 349274732044.3

Displaying genes 3501 – 3510 of 3557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

351 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0003986adenosylcob(III)inamide-GDPC68H95CoN21O21P2Chemical structure of adenosylcob(III)inamide-GDPNot available
Average1663.515Da
Monoisotopic1662.582406Da
BASm0003987cob(I)alaminC62H88CoN13O14PChemical structure of cob(I)alamin18534-66-2
Average1329.3478Da
Monoisotopic1328.564331Da
BASm0003992adenosylcob(III)alamin 5'-phosphateC72H99CoN18O20P2Chemical structure of adenosylcob(III)alamin 5'-phosphateNot available
Average1657.572Da
Monoisotopic1656.610118Da
BASm00040072-methoxy-6-all-trans-octaprenyl-1,4-benzoquinolC47H72O3Chemical structure of 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinolNot available
Average685.0728Da
Monoisotopic684.5481462Da
BASm00040133'-UMPC9H11N2O9PNot available35170-03-7
Average322.167Da
Monoisotopic322.0213141Da
BASm0004092UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC41H61N9O28P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1189.924Da
Monoisotopic1189.312320676Da
BASm0004093di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC87H139N7O23P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1713.045Da
Monoisotopic1711.941952079Da
BASm0004098L-alanyl-L-glutamateC8H13N2O5Chemical structure of L-alanyl-L-glutamateNot available
Average217.1992Da
Monoisotopic217.082446536Da

Displaying 71–80 of 351 metabolites