Helicobacter pylori UM038

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori UM038 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. This organism is typically found in host-associated habitats, suggesting a strong association with living hosts. H. pylori UM038 exists as single cells and is notable for its flagella presence, indicating potential motility despite its classification as non-mobile. This bacterium is mesophilic, with an optimal growth temperature of 37°C, which aligns with the average human body temperature, reflecting its adaptation to a host environment. H. pylori UM038 has a unique cellular structure, consisting of two membranes and a single replicon, which is characteristic of Gram-negative bacteria. The biotic relationship of H. pylori UM038 is described as free-living, which may suggest potential interactions with its host or the surrounding microbiota. The accession number AUSL00000000.1 provides a reference for genetic and genomic studies related to this strain. In summary, Helicobacter pylori UM038 exemplifies the adaptations of bacteria that thrive within host environments, particularly in the human gastrointestinal tract. Its microaerophilic nature and optimal growth temperature indicate a specific ecological niche, potentially influencing its role in human health and disease. Understanding these traits is crucial for further research into the pathogenicity and ecological dynamics of H. pylori within its host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainUM038

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori UM038
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori UM038


Gene Summary

Adenine Count

542553 bp

Thymine Count

542252 bp

Guanine Count

339671 bp

Cytosine Count

337572 bp

Genome Length

1762049 bp

Protein-coding Genes

1652 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribulose-phosphate 3-epimeraseN199_00990Not AvailableNegative687894 - 68854723958.4
fructose-1 6-bisphosphataseN199_00995Not AvailablePositive688618 - 68949033020.8
hypothetical proteinN199_01000Not AvailablePositive689490 - 6896937617.0
type ii methylaseN199_01005Not AvailablePositive689706 - 69060234582.2
type ii restriction enzymeN199_01010Not AvailablePositive690595 - 69132628694.0
hypothetical proteinN199_01015Not AvailableNegative691342 - 69187520823.0
elongation factor tsN199_01020Not AvailableNegative691934 - 69300139729.1
30s ribosomal protein s2N199_01025Not AvailableNegative693001 - 69384332663.7
recombinase recbN199_01030Not AvailablePositive694047 - 696896109771.0
sodium:proton antiporterN199_01035Not AvailablePositive696920 - 69823647865.2

Displaying genes 661 – 670 of 1712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.