Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain dnLKV3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1512543 bp
Thymine Count
1546585 bp
Guanine Count
1228094 bp
Cytosine Count
1161225 bp
Genome Length
5448448 bp
Protein-coding Genes
4574 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconate 5-dehydrogenase | C802_00324 | Not Available | - | 324434 - 325237 | 28572.5 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | C802_00325 | Not Available | - | 325274 - 326116 | 31762.7 |
| 16s ribosomal rna | Not Available | Not Available | + | 327225 - 328741 | Not Available |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | C802_00326 | Not Available | - | 326287 - 327687 | 52359.6 |
| dihydrolipoyl dehydrogenase | C802_00327 | Not Available | - | 327687 - 329027 | 47838.9 |
| hypothetical protein | C802_00328 | Not Available | - | 329051 - 329458 | 15412.5 |
| rna polymerase sigma-70 factor, expansion family 1 | C802_00329 | Not Available | + | 330307 - 330858 | 21757.8 |
| beta-galactosidase | C802_00330 | Not Available | - | 331014 - 335036 | 150342.0 |
| glycosyl hydrolase family 109 protein 4 | C802_00331 | Not Available | - | 335213 - 336754 | 56859.0 |
| beta-galactosidase | C802_00332 | Not Available | - | 336783 - 339062 | 86303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
