Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase a | HMPREF1534_00077 | Not Available | - | 90091 - 90936 | 31851.8 |
| hypothetical protein | HMPREF1534_00078 | Not Available | + | 91036 - 92040 | 36996.5 |
| xaa-his dipeptidase | HMPREF1534_00079 | Not Available | + | 92037 - 93497 | 53352.6 |
| y4mf family transcriptional regulator | HMPREF1534_00080 | Not Available | + | 93887 - 94102 | 8015.88 |
| hipa domain-containing protein | HMPREF1534_00081 | Not Available | + | 94099 - 94422 | 12140.6 |
| hypothetical protein | HMPREF1534_00082 | Not Available | + | 94433 - 95371 | 35640.7 |
| hypothetical protein | HMPREF1534_00083 | Not Available | + | 95481 - 101126 | 211656.0 |
| hypothetical protein | HMPREF1534_00084 | Not Available | - | 101232 - 101681 | 17042.6 |
| hypothetical protein | HMPREF1534_00085 | Not Available | + | 101816 - 102865 | 38390.6 |
| lao/ao transport system atpase | HMPREF1534_00086 | Not Available | + | 102868 - 103965 | 40257.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


