Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase sure | HMPREF1534_00067 | Not Available | + | 78755 - 79534 | 28531.2 |
| lipid-a-disaccharide synthase | HMPREF1534_00068 | Not Available | + | 79531 - 80670 | 43130.7 |
| hypothetical protein | HMPREF1534_00069 | Not Available | - | 80870 - 81709 | 30912.4 |
| atp-dependent metallopeptidase hflb | HMPREF1534_00070 | Not Available | - | 81800 - 83794 | 74046.5 |
| iojap-like ribosome-associated protein | HMPREF1534_00071 | Not Available | - | 83813 - 84172 | 13440.0 |
| hypothetical protein | HMPREF1534_00072 | Not Available | + | 84372 - 84581 | 8046.94 |
| Trna-gln | Not Available | Not Available | + | 84689 - 84762 | Not Available |
| hypothetical protein | HMPREF1534_00074 | Not Available | + | 85083 - 86441 | 52811.7 |
| hypothetical protein | HMPREF1534_00075 | Not Available | - | 86698 - 88506 | 70821.1 |
| magnesium transporter | HMPREF1534_00076 | Not Available | - | 88716 - 90056 | 49529.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


