Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00047 | Not Available | - | 55159 - 55305 | 4961.91 |
| hypothetical protein | HMPREF1534_00048 | Not Available | - | 55717 - 55930 | 8229.88 |
| Trna-pro | Not Available | Not Available | + | 56079 - 56153 | Not Available |
| 3-dehydroquinate synthase | HMPREF1534_00050 | Not Available | - | 56288 - 57343 | 39588.9 |
| hypothetical protein | HMPREF1534_00051 | Not Available | + | 57398 - 57844 | 17057.8 |
| hypothetical protein | HMPREF1534_00052 | Not Available | + | 57925 - 60825 | 108325.0 |
| cardiolipin synthase | HMPREF1534_00053 | Not Available | + | 60912 - 62348 | 55697.6 |
| rsmd family rna methyltransferase | HMPREF1534_00054 | Not Available | - | 62320 - 62877 | 21235.1 |
| hypothetical protein | HMPREF1534_00055 | Not Available | - | 62868 - 63686 | 31708.1 |
| hypothetical protein | HMPREF1534_00056 | Not Available | - | 63689 - 64375 | 25313.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


