Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00536 | Not Available | Positive | 664900 - 665076 | 6807.22 |
| dihydroxy-acid dehydratase | HMPREF1534_00537 | Not Available | Positive | 665440 - 667242 | 64043.0 |
| acetolactate synthase, large subunit, biosynthetic type | HMPREF1534_00538 | Not Available | Positive | 667263 - 668960 | 62016.7 |
| acetolactate synthase, small subunit | HMPREF1534_00539 | Not Available | Positive | 668973 - 669536 | 21657.2 |
| hypothetical protein | HMPREF1534_00540 | Not Available | Positive | 669536 - 670276 | 28240.7 |
| ketol-acid reductoisomerase | HMPREF1534_00541 | Not Available | Positive | 670328 - 671371 | 38137.5 |
| hypothetical protein | HMPREF1534_00542 | Not Available | Negative | 671618 - 673747 | 78835.5 |
| hypothetical protein | HMPREF1534_00543 | Not Available | Negative | 673855 - 675114 | 47488.9 |
| hypothetical protein | HMPREF1534_00544 | Not Available | Negative | 675128 - 675742 | 23449.6 |
| hypothetical protein | HMPREF1534_00545 | Not Available | Negative | 675784 - 677139 | 50574.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


