Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00506 | Not Available | Negative | 630534 - 630770 | 8939.04 |
| hypothetical protein | HMPREF1534_00507 | Not Available | Negative | 630901 - 632154 | 48062.6 |
| excisionase family dna binding domain-containing protein | HMPREF1534_00508 | Not Available | Negative | 632151 - 632711 | 21879.8 |
| chaperone dnak | HMPREF1534_00509 | Not Available | Negative | 632921 - 634837 | 68342.2 |
| hypothetical protein | HMPREF1534_00510 | Not Available | Positive | 634889 - 635089 | 7670.32 |
| hypothetical protein | HMPREF1534_00511 | Not Available | Positive | 635076 - 635189 | 4396.25 |
| hypothetical protein | HMPREF1534_00512 | Not Available | Negative | 635348 - 636121 | 27942.6 |
| hypothetical protein | HMPREF1534_00513 | Not Available | Positive | 636271 - 637515 | 46930.2 |
| hypothetical protein | HMPREF1534_00514 | Not Available | Positive | 637594 - 638787 | 44974.5 |
| hypothetical protein | HMPREF1534_00515 | Not Available | Positive | 638803 - 639249 | 16836.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


