Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00436 | Not Available | Positive | 535427 - 537679 | 85150.4 |
| hypothetical protein | HMPREF1534_00437 | Not Available | Positive | 537688 - 540192 | 94276.2 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF1534_00438 | Not Available | Positive | 540371 - 541534 | 42267.2 |
| hypothetical protein | HMPREF1534_00439 | Not Available | Negative | 541758 - 542411 | 24563.9 |
| hypothetical protein | HMPREF1534_00440 | Not Available | Negative | 542408 - 543337 | 35584.3 |
| hypothetical protein | HMPREF1534_00441 | Not Available | Negative | 543475 - 544149 | 25789.8 |
| hypothetical protein | HMPREF1534_00442 | Not Available | Positive | 544541 - 545386 | 32767.3 |
| hypothetical protein | HMPREF1534_00443 | Not Available | Positive | 545625 - 546188 | 20270.6 |
| hypothetical protein | HMPREF1534_00444 | Not Available | Positive | 546467 - 547162 | 26701.3 |
| hypothetical protein | HMPREF1534_00445 | Not Available | Positive | 547213 - 548694 | 56840.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


