Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00028 | Not Available | - | 36185 - 36472 | 10919.7 |
| cdp-diacylglycerol-serine o-phosphatidyltransferase | HMPREF1534_00029 | Not Available | - | 36527 - 37234 | 26083.7 |
| phosphatidylserine decarboxylase proenzyme | HMPREF1534_00030 | Not Available | - | 37244 - 37930 | 25944.0 |
| dna polymerase iii, alpha subunit | HMPREF1534_00031 | Not Available | + | 38122 - 41919 | 143906.0 |
| 5s ribosomal rna | Not Available | Not Available | + | 41412 - 41521 | Not Available |
| thioredoxin | HMPREF1534_00032 | Not Available | + | 41965 - 42279 | 11498.8 |
| hypothetical protein | HMPREF1534_00033 | Not Available | + | 42317 - 42652 | 12662.4 |
| hypothetical protein | HMPREF1534_00034 | Not Available | + | 42687 - 42869 | 6730.25 |
| hypothetical protein | HMPREF1534_00035 | Not Available | - | 42797 - 45091 | 87473.7 |
| hypothetical protein | HMPREF1534_00036 | Not Available | - | 45245 - 46135 | 34423.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


