Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03923 | Not Available | - | 4471498 - 4471773 | 10550.9 |
| conjugative transposon trak protein | HMPREF1534_03924 | Not Available | - | 4471770 - 4472393 | 23860.5 |
| conjugative transposon traj protein | HMPREF1534_03925 | Not Available | - | 4472417 - 4473520 | 40116.4 |
| hypothetical protein | HMPREF1534_03926 | Not Available | - | 4473524 - 4474060 | 20593.9 |
| hypothetical protein | HMPREF1534_03927 | Not Available | - | 4474053 - 4475888 | 72038.6 |
| hypothetical protein | HMPREF1534_03928 | Not Available | + | 4476290 - 4476430 | 5282.54 |
| hypothetical protein | HMPREF1534_03929 | Not Available | - | 4476409 - 4476636 | 8326.15 |
| hypothetical protein | HMPREF1534_03930 | Not Available | - | 4476663 - 4477031 | 13588.3 |
| trag family conjugation system atpase | HMPREF1534_03931 | Not Available | - | 4477045 - 4478916 | 71562.3 |
| hypothetical protein | HMPREF1534_03932 | Not Available | + | 4479736 - 4482483 | 98830.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


