Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03913 | Not Available | + | 4464673 - 4465089 | 16108.9 |
| hypothetical protein | HMPREF1534_03914 | Not Available | + | 4465094 - 4466377 | 49821.3 |
| hypothetical protein | HMPREF1534_03915 | Not Available | + | 4466802 - 4467020 | 8669.27 |
| hypothetical protein | HMPREF1534_03916 | Not Available | + | 4467020 - 4467328 | 11671.2 |
| hypothetical protein | HMPREF1534_03917 | Not Available | + | 4467523 - 4467867 | 13519.5 |
| hypothetical protein | HMPREF1534_03918 | Not Available | - | 4467940 - 4468053 | 4340.29 |
| hypothetical protein | HMPREF1534_03919 | Not Available | - | 4468050 - 4468481 | 16483.4 |
| hypothetical protein | HMPREF1534_03920 | Not Available | - | 4468490 - 4469053 | 20657.9 |
| conjugative transposon tran protein | HMPREF1534_03921 | Not Available | - | 4469055 - 4470026 | 36745.2 |
| conjugative transposon tram protein | HMPREF1534_03922 | Not Available | - | 4470081 - 4471514 | 53244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


