Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03893 | Not Available | + | 4441998 - 4442648 | 25415.3 |
| hypothetical protein | HMPREF1534_03894 | Not Available | + | 4442653 - 4443465 | 28705.8 |
| mannonate dehydratase | HMPREF1534_03895 | Not Available | + | 4443479 - 4444657 | 44866.0 |
| hypothetical protein | HMPREF1534_03896 | Not Available | + | 4444692 - 4444814 | 4748.66 |
| hypothetical protein | HMPREF1534_03897 | Not Available | - | 4444797 - 4447250 | 91415.1 |
| hypothetical protein | HMPREF1534_03898 | Not Available | - | 4447297 - 4448517 | 46288.0 |
| tigr00730 family protein | HMPREF1534_03899 | Not Available | + | 4448622 - 4449155 | 19721.7 |
| kpsf/gutq family sugar isomerase | HMPREF1534_03900 | Not Available | + | 4449171 - 4449773 | 21686.3 |
| hypothetical protein | HMPREF1534_03901 | Not Available | + | 4449789 - 4450826 | 38470.9 |
| hypothetical protein | HMPREF1534_03902 | Not Available | - | 4450830 - 4453316 | 96180.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


