Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03833 | Not Available | - | 4362825 - 4363337 | 19706.7 |
| dna mismatch repair protein muts | HMPREF1534_03834 | Not Available | + | 4363680 - 4366301 | 98334.9 |
| hypothetical protein | HMPREF1534_03835 | Not Available | + | 4366366 - 4368363 | 75965.7 |
| hypothetical protein | HMPREF1534_03836 | Not Available | + | 4368474 - 4369385 | 35548.9 |
| hypothetical protein | HMPREF1534_03837 | Not Available | + | 4370090 - 4371115 | 40214.4 |
| hypothetical protein | HMPREF1534_03838 | Not Available | - | 4371230 - 4372981 | 68010.5 |
| hypothetical protein | HMPREF1534_03839 | Not Available | - | 4373081 - 4373737 | 25130.9 |
| prolipoprotein diacylglyceryl transferase | HMPREF1534_03840 | Not Available | - | 4373734 - 4374561 | 31706.4 |
| 2-dehydropantoate 2-reductase | HMPREF1534_03841 | Not Available | - | 4374573 - 4375493 | 33647.8 |
| gtp-binding protein ychf | HMPREF1534_03842 | Not Available | - | 4375508 - 4376611 | 40762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


