Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00306 | Not Available | Negative | 379047 - 379490 | 17124.5 |
| hypothetical protein | HMPREF1534_00307 | Not Available | Negative | 379513 - 380196 | 26855.4 |
| hypothetical protein | HMPREF1534_00308 | Not Available | Negative | 380193 - 381086 | 33794.2 |
| hypothetical protein | HMPREF1534_00309 | Not Available | Negative | 381148 - 383241 | 80818.4 |
| hypothetical protein | HMPREF1534_00310 | Not Available | Negative | 383445 - 383660 | 7583.38 |
| hypothetical protein | HMPREF1534_00311 | Not Available | Negative | 383806 - 384006 | 7625.19 |
| hypothetical protein | HMPREF1534_00312 | Not Available | Negative | 384018 - 384230 | 7887.61 |
| hypothetical protein | HMPREF1534_00313 | Not Available | Positive | 384387 - 385187 | 30471.3 |
| hypothetical protein | HMPREF1534_00314 | Not Available | Positive | 385221 - 386564 | 51853.2 |
| Trna-pseudo | Not Available | Not Available | Positive | 386697 - 386780 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


