Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00177 | Not Available | + | 217830 - 218552 | 26746.5 |
| lipoprotein-releasing system atp-binding protein lold | HMPREF1534_00178 | Not Available | + | 218555 - 219214 | 23769.8 |
| hypothetical protein | HMPREF1534_00179 | Not Available | - | 219211 - 220161 | 35000.4 |
| hypothetical protein | HMPREF1534_00180 | Not Available | - | 220238 - 220465 | 8517.31 |
| hypothetical protein | HMPREF1534_00181 | Not Available | - | 220503 - 221645 | 42046.6 |
| hypothetical protein | HMPREF1534_00182 | Not Available | + | 221722 - 222555 | 31743.2 |
| hypothetical protein | HMPREF1534_00183 | Not Available | + | 222680 - 223537 | 34938.0 |
| sigma-70 family rna polymerase sigma factor | HMPREF1534_00184 | Not Available | + | 223679 - 224245 | 22207.6 |
| hypothetical protein | HMPREF1534_00185 | Not Available | + | 224242 - 224667 | 16631.0 |
| hypothetical protein | HMPREF1534_00186 | Not Available | + | 224680 - 225747 | 41495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


