Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00107 | Not Available | - | 120518 - 121147 | 22888.9 |
| tonb-dependent receptor | HMPREF1534_00108 | Not Available | + | 121403 - 124171 | 104266.0 |
| hypothetical protein | HMPREF1534_00109 | Not Available | + | 124185 - 125156 | 37168.7 |
| hypothetical protein | HMPREF1534_00110 | Not Available | + | 125212 - 126642 | 53479.8 |
| dna topoisomerase iii | HMPREF1534_00111 | Not Available | - | 126659 - 128848 | 81991.7 |
| 5s ribosomal rna | Not Available | Not Available | + | 129684 - 129793 | Not Available |
| hypothetical protein | HMPREF1534_00112 | Not Available | - | 128915 - 129781 | 33314.2 |
| hypothetical protein | HMPREF1534_00113 | Not Available | - | 129894 - 131828 | 73121.2 |
| methylmalonyl-coa mutase large subunit | HMPREF1534_00114 | Not Available | - | 132028 - 134172 | 78977.6 |
| methylmalonyl-coa mutase, small subunit | HMPREF1534_00115 | Not Available | - | 134181 - 136040 | 68478.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


