Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00097 | Not Available | + | 114205 - 114663 | 16558.7 |
| hypothetical protein | HMPREF1534_00098 | Not Available | + | 114704 - 115294 | 22503.9 |
| hypothetical protein | HMPREF1534_00099 | Not Available | + | 115294 - 115758 | 17925.9 |
| hypothetical protein | HMPREF1534_00100 | Not Available | - | 115837 - 116373 | 20928.0 |
| hypothetical protein | HMPREF1534_00101 | Not Available | - | 116406 - 117692 | 48411.4 |
| hypothetical protein | HMPREF1534_00102 | Not Available | + | 117821 - 118297 | 17888.6 |
| hypothetical protein | HMPREF1534_00103 | Not Available | - | 118307 - 118801 | 18649.3 |
| thymidylate synthase | HMPREF1534_00104 | Not Available | - | 118822 - 119616 | 30499.5 |
| hypothetical protein | HMPREF1534_00105 | Not Available | - | 119656 - 119982 | 12353.2 |
| sigma-70 family rna polymerase sigma factor | HMPREF1534_00106 | Not Available | - | 119969 - 120514 | 20779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


