Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00906 | Not Available | Positive | 1067155 - 1068558 | 54459.5 |
| hypothetical protein | HMPREF1534_00907 | Not Available | Negative | 1068927 - 1070141 | 47010.2 |
| hypothetical protein | HMPREF1534_00908 | Not Available | Positive | 1070348 - 1071073 | 27809.7 |
| hypothetical protein | HMPREF1534_00909 | Not Available | Positive | 1071086 - 1071904 | 30340.6 |
| Trna-asp | Not Available | Not Available | Positive | 1072101 - 1072177 | Not Available |
| hypothetical protein | HMPREF1534_00910 | Not Available | Negative | 1071988 - 1072149 | 5889.06 |
| Trna-asp | Not Available | Not Available | Positive | 1072203 - 1072279 | Not Available |
| hypothetical protein | HMPREF1534_00913 | Not Available | Positive | 1072529 - 1073113 | 22330.3 |
| hypothetical protein | HMPREF1534_00914 | Not Available | Negative | 1073110 - 1073634 | 20374.5 |
| hypothetical protein | HMPREF1534_00915 | Not Available | Negative | 1073634 - 1074098 | 17656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


