Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00896 | Not Available | Positive | 1053101 - 1054966 | 72436.4 |
| hypothetical protein | HMPREF1534_00897 | Not Available | Negative | 1055157 - 1059101 | 150692.0 |
| hypothetical protein | HMPREF1534_00898 | Not Available | Positive | 1059165 - 1059332 | 6797.48 |
| hypothetical protein | HMPREF1534_00899 | Not Available | Positive | 1059501 - 1059884 | 14306.1 |
| hypothetical protein | HMPREF1534_00900 | Not Available | Positive | 1060410 - 1061750 | 51967.7 |
| hypothetical protein | HMPREF1534_00901 | Not Available | Positive | 1061823 - 1063118 | 49135.9 |
| hypothetical protein | HMPREF1534_00902 | Not Available | Positive | 1063126 - 1064145 | 40474.0 |
| hypothetical protein | HMPREF1534_00903 | Not Available | Positive | 1064408 - 1064674 | 9584.77 |
| hypothetical protein | HMPREF1534_00904 | Not Available | Positive | 1064689 - 1065765 | 40742.9 |
| hypothetical protein | HMPREF1534_00905 | Not Available | Positive | 1065971 - 1066930 | 37159.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


