Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00886 | Not Available | Negative | 1044072 - 1044851 | 29698.3 |
| dna polymerase iii, beta subunit | HMPREF1534_00887 | Not Available | Negative | 1044879 - 1046003 | 41347.6 |
| hypothetical protein | HMPREF1534_00888 | Not Available | Positive | 1046158 - 1046535 | 14077.5 |
| transcription termination factor rho | HMPREF1534_00889 | Not Available | Negative | 1046943 - 1049030 | 77761.5 |
| hypothetical protein | HMPREF1534_00890 | Not Available | Positive | 1049219 - 1049407 | 7159.76 |
| hypothetical protein | HMPREF1534_00891 | Not Available | Positive | 1049355 - 1049732 | 13076.9 |
| hypothetical protein | HMPREF1534_00892 | Not Available | Positive | 1049851 - 1051056 | 45815.8 |
| hypothetical protein | HMPREF1534_00893 | Not Available | Positive | 1051073 - 1051855 | 30610.2 |
| hypothetical protein | HMPREF1534_00894 | Not Available | Positive | 1051862 - 1052239 | 14751.4 |
| hypothetical protein | HMPREF1534_00895 | Not Available | Positive | 1052262 - 1053092 | 31700.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


