Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00796 | Not Available | Negative | 938685 - 940178 | 54068.9 |
| hypothetical protein | HMPREF1534_00797 | Not Available | Positive | 940341 - 941096 | 28972.7 |
| hypothetical protein | HMPREF1534_00798 | Not Available | Positive | 941192 - 943858 | 99559.1 |
| hypothetical protein | HMPREF1534_00799 | Not Available | Negative | 943947 - 944813 | 31986.4 |
| hypothetical protein | HMPREF1534_00800 | Not Available | Negative | 944819 - 946141 | 50135.5 |
| glutaminase | HMPREF1534_00801 | Not Available | Negative | 946288 - 947250 | 34806.9 |
| glutamate decarboxylase | HMPREF1534_00802 | Not Available | Negative | 947438 - 948886 | 54735.7 |
| hypothetical protein | HMPREF1534_00803 | Not Available | Positive | 949077 - 950267 | 43420.3 |
| hypothetical protein | HMPREF1534_00804 | Not Available | Positive | 950531 - 951430 | 32892.7 |
| hypothetical protein | HMPREF1534_00805 | Not Available | Positive | 951573 - 952034 | 16983.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


