Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system regulatory protein phou | HMPREF1534_00786 | Not Available | Positive | 924675 - 925367 | 26211.7 |
| hypothetical protein | HMPREF1534_00787 | Not Available | Positive | 925789 - 928365 | 99395.6 |
| hypothetical protein | HMPREF1534_00788 | Not Available | Positive | 928525 - 929802 | 47223.9 |
| hypothetical protein | HMPREF1534_00789 | Not Available | Positive | 929818 - 930774 | 34549.8 |
| c_gcaxxg_c_c family protein | HMPREF1534_00790 | Not Available | Positive | 930771 - 931232 | 16848.2 |
| hypothetical protein | HMPREF1534_00791 | Not Available | Positive | 931391 - 931594 | 7435.07 |
| elongation factor 4 | HMPREF1534_00792 | Not Available | Positive | 931694 - 933475 | 66449.5 |
| hypothetical protein | HMPREF1534_00793 | Not Available | Positive | 933564 - 934742 | 44288.7 |
| na(+)/h(+) antiporter nhaa | HMPREF1534_00794 | Not Available | Positive | 934874 - 936211 | 48303.3 |
| hypothetical protein | HMPREF1534_00795 | Not Available | Negative | 936238 - 938514 | 87853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


