Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00776 | Not Available | Negative | 913995 - 915212 | 47458.1 |
| hypothetical protein | HMPREF1534_00777 | Not Available | Positive | 915505 - 916122 | 23501.5 |
| hypothetical protein | HMPREF1534_00778 | Not Available | Negative | 916183 - 916686 | 17983.8 |
| hypothetical protein | HMPREF1534_00779 | Not Available | Negative | 916748 - 917374 | 23019.3 |
| hypothetical protein | HMPREF1534_00780 | Not Available | Negative | 917385 - 918896 | 57930.9 |
| glutamine-trna ligase | HMPREF1534_00781 | Not Available | Negative | 918907 - 920646 | 67095.5 |
| phosphate binding protein | HMPREF1534_00782 | Not Available | Negative | 920705 - 921523 | 29984.5 |
| phosphate abc transporter, permease pstc | HMPREF1534_00783 | Not Available | Positive | 921761 - 922966 | 43186.1 |
| phosphate abc transporter, permease psta | HMPREF1534_00784 | Not Available | Positive | 922978 - 923865 | 32258.6 |
| phosphate import atp-binding protein pstb | HMPREF1534_00785 | Not Available | Positive | 923876 - 924628 | 28081.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


