Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00766 | Not Available | Negative | 905395 - 906558 | 45784.1 |
| hypothetical protein | HMPREF1534_00767 | Not Available | Positive | 906905 - 907504 | 23008.4 |
| had hydrolase, family ib | HMPREF1534_00768 | Not Available | Positive | 907508 - 908101 | 22906.6 |
| hypothetical protein | HMPREF1534_00769 | Not Available | Positive | 908232 - 908600 | 14084.1 |
| hypothetical protein | HMPREF1534_00770 | Not Available | Positive | 908602 - 908946 | 13555.6 |
| hypothetical protein | HMPREF1534_00771 | Not Available | Positive | 909035 - 910816 | 68575.3 |
| hypothetical protein | HMPREF1534_00772 | Not Available | Positive | 910896 - 911282 | 14579.8 |
| hypothetical protein | HMPREF1534_00773 | Not Available | Positive | 911313 - 911570 | 10034.1 |
| hypothetical protein | HMPREF1534_00774 | Not Available | Positive | 911807 - 913243 | 55044.2 |
| hypothetical protein | HMPREF1534_00775 | Not Available | Positive | 913452 - 913892 | 16996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


