Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00756 | Not Available | Positive | 894821 - 895927 | 41703.0 |
| hypothetical protein | HMPREF1534_00757 | Not Available | Positive | 895930 - 896850 | 35614.3 |
| hypothetical protein | HMPREF1534_00758 | Not Available | Positive | 896883 - 898319 | 54076.4 |
| hypothetical protein | HMPREF1534_00759 | Not Available | Positive | 898330 - 899262 | 36919.9 |
| hypothetical protein | HMPREF1534_00760 | Not Available | Positive | 899283 - 900101 | 31917.3 |
| hypothetical protein | HMPREF1534_00761 | Not Available | Positive | 900112 - 900924 | 31690.5 |
| hypothetical protein | HMPREF1534_00762 | Not Available | Positive | 900940 - 902124 | 45313.5 |
| hypothetical protein | HMPREF1534_00763 | Not Available | Positive | 902108 - 903190 | 41946.7 |
| hypothetical protein | HMPREF1534_00764 | Not Available | Positive | 903194 - 903967 | 29598.0 |
| hypothetical protein | HMPREF1534_00765 | Not Available | Positive | 904016 - 905098 | 40387.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


