Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00726 | Not Available | Positive | 865687 - 866574 | 34944.4 |
| hypothetical protein | HMPREF1534_00727 | Not Available | Positive | 866590 - 867759 | 45143.9 |
| hypothetical protein | HMPREF1534_00728 | Not Available | Positive | 867735 - 868628 | 34578.2 |
| hypothetical protein | HMPREF1534_00729 | Not Available | Positive | 868640 - 869917 | 47554.2 |
| hypothetical protein | HMPREF1534_00730 | Not Available | Positive | 869922 - 870755 | 32465.3 |
| hypothetical protein | HMPREF1534_00731 | Not Available | Positive | 870752 - 871555 | 30752.8 |
| hypothetical protein | HMPREF1534_00732 | Not Available | Negative | 871540 - 872502 | 37697.3 |
| hypothetical protein | HMPREF1534_00733 | Not Available | Negative | 872506 - 873330 | 32905.5 |
| hypothetical protein | HMPREF1534_00734 | Not Available | Negative | 873337 - 873951 | 23206.7 |
| hypothetical protein | HMPREF1534_00735 | Not Available | Negative | 873948 - 875117 | 44567.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


