Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00716 | Not Available | Negative | 854920 - 856041 | 43352.5 |
| hypothetical protein | HMPREF1534_00717 | Not Available | Negative | 856049 - 856897 | 32527.1 |
| hypothetical protein | HMPREF1534_00718 | Not Available | Negative | 856904 - 858055 | 44640.5 |
| hypothetical protein | HMPREF1534_00719 | Not Available | Negative | 858117 - 859253 | 44433.6 |
| hypothetical protein | HMPREF1534_00720 | Not Available | Negative | 859250 - 860401 | 43831.6 |
| hypothetical protein | HMPREF1534_00721 | Not Available | Negative | 860398 - 861546 | 44434.8 |
| hypothetical protein | HMPREF1534_00722 | Not Available | Negative | 861543 - 862691 | 44218.8 |
| hypothetical protein | HMPREF1534_00723 | Not Available | Negative | 862688 - 863860 | 44713.4 |
| hypothetical protein | HMPREF1534_00724 | Not Available | Positive | 864268 - 864492 | 8742.85 |
| hypothetical protein | HMPREF1534_00725 | Not Available | Negative | 864594 - 865556 | 37289.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


