Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00696 | Not Available | Negative | 835555 - 835995 | 16828.9 |
| hypothetical protein | HMPREF1534_00697 | Not Available | Negative | 836258 - 836728 | 17892.6 |
| hypothetical protein | HMPREF1534_00698 | Not Available | Negative | 836805 - 837353 | 21519.1 |
| hypothetical protein | HMPREF1534_00699 | Not Available | Negative | 837531 - 838583 | 39337.5 |
| hypothetical protein | HMPREF1534_00700 | Not Available | Negative | 838601 - 838750 | 5437.56 |
| hypothetical protein | HMPREF1534_00701 | Not Available | Positive | 839424 - 840512 | 41240.6 |
| hypothetical protein | HMPREF1534_00702 | Not Available | Negative | 840790 - 842487 | 64488.5 |
| hypothetical protein | HMPREF1534_00703 | Not Available | Negative | 842503 - 843288 | 29261.4 |
| hypothetical protein | HMPREF1534_00704 | Not Available | Positive | 843339 - 843491 | 6107.48 |
| malonyl coa-acyl carrier protein transacylase | HMPREF1534_00705 | Not Available | Negative | 843448 - 844335 | 31366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


