Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00057 | Not Available | + | 64473 - 65891 | 54028.6 |
| hypothetical protein | HMPREF1534_00058 | Not Available | - | 66020 - 67999 | 75019.6 |
| alanyl-trna synthetase | HMPREF1534_00059 | Not Available | - | 68175 - 70793 | 97193.1 |
| hypothetical protein | HMPREF1534_00060 | Not Available | + | 70927 - 71895 | 36414.9 |
| hypothetical protein | HMPREF1534_00061 | Not Available | + | 71936 - 72283 | 13583.6 |
| rela/spot family protein | HMPREF1534_00062 | Not Available | - | 72383 - 74650 | 86375.9 |
| hypothetical protein | HMPREF1534_00063 | Not Available | - | 74752 - 76035 | 48416.5 |
| hypothetical protein | HMPREF1534_00064 | Not Available | - | 76017 - 76775 | 28563.3 |
| parb-like partition protein | HMPREF1534_00065 | Not Available | - | 76830 - 77726 | 33560.6 |
| hypothetical protein | HMPREF1534_00066 | Not Available | - | 77730 - 78497 | 28042.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


